While small vehicles have been allowed right up to the Badrinath shrine, as earlier, vehicles will be stopped at Soneprayag on the Kedarnath route and pilgrims will have to trek 24 km to reach the Kedarnath temple.
The number of pilgrims will be "controlled by the state government this time round" and health check-up's will be mandatory for pilgrims.
"The state government will be issuing travel passes for the pilgrimage from now on," an official told IANS.
Earlier, in a meeting between religious groups, seers, temple management members, Uttarakhand Chief Minister Vijay Bahuguna and his officials, it was decided that the route to the famous shrines, closed for common people June 17 onwards due to heavy devastation, would be re-opened Oct 5.
Officials said earlier the date fixed for reopening of the shrines was Oct 1 but due to a weather office warning of rains till Oct 4 and the ongoing inauspicious period of "Pitra Paksh", the date was deferred to Oct 5.
Officials, however, said that heavy vehicles like buses and others will still not be allowed on the motorable paths as the state government was not "prepared for heavy rush as yet".
The pathways used by mules and horses on the Kedarnath route have also been repaired and the pilgrims will allowed on the route from Soneprayag in the Rudraprayag district, the official added.
Formal "puja" was restarted in the Kedarnath shrine last month. Puja has also been started in the Hemkund Saheb, the Gurdwara enroute to Badrinath.
The pilgrimage however would not be for long as their "kapat" (doors) would close for the winter breaks from December onwards.
Sources say that the Bahuguna government fast tracked the reopening of the shrines to send out a message of normalcy and fast rehabilitation.